ClermonTyping

clermontyping.iame-research.center a website for Escherichia Escherichia determining species phylogroups from contigs or whole genome.

Supported by

IAME Inserm Diderot P13 FRM

Getting source code

A standalone version is available on Github.

Cite

[1] AB.Nahmias, J.Beghain, H.Le Nagard, E.Denamur, O.Clermont. ClermonTyping: An in silico method for Escherichia albertii, E. fergusonii and E. clade assignation and E. coli sensu stricto phylotyping. Submitted.

Contact us

Licensing - GPL v3

The source code is licensed under GNU General Public License, version 3